######## QUAST Results ######## QUAST version is: 5.2.0 Assembly Ahalleri_765_v2.1.0.cds # contigs (>= 0 bp) 42987 # contigs (>= 1000 bp) 24094 # contigs (>= 5000 bp) 539 # contigs (>= 10000 bp) 37 # contigs (>= 25000 bp) 0 # contigs (>= 50000 bp) 0 Total length (>= 0 bp) 57958478 Total length (>= 1000 bp) 46415415 Total length (>= 5000 bp) 3426195 Total length (>= 10000 bp) 445215 Total length (>= 25000 bp) 0 Total length (>= 50000 bp) 0 # contigs 36568 Largest contig 16152 Total length 55768989 GC (%) 44.32 N50 1752 N90 837 auN 2207.3 L50 10140 L90 28201 # N's per 100 kbp 0.18 ######## BUSCO Results ######## # BUSCO version is: 5.4.3 # The lineage dataset is: embryophyta_odb10 (Creation date: 2024-01-08, number of genomes: 50, number of BUSCOs: 1614) # Summarized benchmarking in BUSCO notation for file /scratch/iharding/08/112323ee37a95c65f4e589133617db/input_seqs/Ahalleri_765_v2.1.0.protein.fa # BUSCO was run in mode: proteins ***** Results: ***** C:94.8%[S:56.1%,D:38.7%],F:0.9%,M:4.3%,n:1614 1529 Complete BUSCOs (C) 905 Complete and single-copy BUSCOs (S) 624 Complete and duplicated BUSCOs (D) 14 Fragmented BUSCOs (F) 71 Missing BUSCOs (M) 1614 Total BUSCO groups searched Dependencies and versions: hmmsearch: 3.1 busco: 5.4.3