######## QUAST Results ######## QUAST version is: 5.2.0 Assembly Ahalleri_765_v2.03 # contigs (>= 0 bp) 212 # contigs (>= 1000 bp) 212 # contigs (>= 5000 bp) 212 # contigs (>= 10000 bp) 212 # contigs (>= 25000 bp) 178 # contigs (>= 50000 bp) 78 Total length (>= 0 bp) 195574599 Total length (>= 1000 bp) 195574599 Total length (>= 5000 bp) 195574599 Total length (>= 10000 bp) 195574599 Total length (>= 25000 bp) 194810598 Total length (>= 50000 bp) 191229279 # contigs 212 Largest contig 27806075 Total length 195574599 GC (%) 36.19 N50 23004698 N90 19580307 auN 21327661.0 L50 4 L90 8 # N's per 100 kbp 3.53 ######## BUSCO Results ######## # BUSCO version is: 5.4.3 # The lineage dataset is: embryophyta_odb10 (Creation date: 2024-01-08, number of genomes: 50, number of BUSCOs: 1614) # Summarized benchmarking in BUSCO notation for file /scratch/iharding/4f/80bc0974fe86b7c36b9d79c77fc374/input_seqs/Ahalleri_765_v2.03.fa # BUSCO was run in mode: euk_genome_met # Gene predictor used: metaeuk ***** Results: ***** C:99.1%[S:95.8%,D:3.3%],F:0.4%,M:0.5%,n:1614 1600 Complete BUSCOs (C) 1547 Complete and single-copy BUSCOs (S) 53 Complete and duplicated BUSCOs (D) 6 Fragmented BUSCOs (F) 8 Missing BUSCOs (M) 1614 Total BUSCO groups searched Assembly Statistics: 212 Number of scaffolds 281 Number of contigs 195574599 Total length 0.004% Percent gaps 23 MB Scaffold N50 3 MB Contigs N50 Dependencies and versions: hmmsearch: 3.1 bbtools: 38.98 metaeuk: 6.a5d39d9 busco: 5.4.3