######## QUAST Results ######## QUAST version is: 5.2.0 Assembly GCA_014182885.2_ASM1418288v2_genomic # contigs (>= 0 bp) 77 # contigs (>= 1000 bp) 77 # contigs (>= 5000 bp) 53 # contigs (>= 10000 bp) 34 # contigs (>= 25000 bp) 20 # contigs (>= 50000 bp) 15 Total length (>= 0 bp) 589484275 Total length (>= 1000 bp) 589484275 Total length (>= 5000 bp) 589419552 Total length (>= 10000 bp) 589278127 Total length (>= 25000 bp) 589052916 Total length (>= 50000 bp) 588890790 # contigs 77 Largest contig 71480542 Total length 589484275 GC (%) 39.23 N50 59516207 N90 40336984 auN 55597734.9 L50 5 L90 10 # N's per 100 kbp 3.39 ######## BUSCO Results ######## # BUSCO version is: 5.4.3 # The lineage dataset is: embryophyta_odb10 (Creation date: 2024-01-08, number of genomes: 50, number of BUSCOs: 1614) # Summarized benchmarking in BUSCO notation for file /scratch/iharding/93/e7702125084190004b07fc8b163505/input_seqs/GCA_014182885.2_ASM1418288v2_genomic.fna # BUSCO was run in mode: euk_genome_met # Gene predictor used: metaeuk ***** Results: ***** C:97.8%[S:92.0%,D:5.8%],F:1.2%,M:1.0%,n:1614 1578 Complete BUSCOs (C) 1485 Complete and single-copy BUSCOs (S) 93 Complete and duplicated BUSCOs (D) 19 Fragmented BUSCOs (F) 17 Missing BUSCOs (M) 1614 Total BUSCO groups searched Assembly Statistics: 77 Number of scaffolds 277 Number of contigs 589484275 Total length 0.003% Percent gaps 59 MB Scaffold N50 4 MB Contigs N50 Dependencies and versions: hmmsearch: 3.1 bbtools: 38.98 metaeuk: 6.a5d39d9 busco: 5.4.3