######## QUAST Results ######## QUAST version is: 5.2.0 Assembly Qrubra_687_v2.0 # contigs (>= 0 bp) 966 # contigs (>= 1000 bp) 966 # contigs (>= 5000 bp) 966 # contigs (>= 10000 bp) 855 # contigs (>= 25000 bp) 613 # contigs (>= 50000 bp) 255 Total length (>= 0 bp) 739579365 Total length (>= 1000 bp) 739579365 Total length (>= 5000 bp) 739579365 Total length (>= 10000 bp) 738761141 Total length (>= 25000 bp) 734445941 Total length (>= 50000 bp) 721257769 # contigs 966 Largest contig 90623836 Total length 739579365 GC (%) 34.83 N50 58110601 N90 39442637 auN 58895826.4 L50 6 L90 12 # N's per 100 kbp 847.78 ######## BUSCO Results ######## # BUSCO version is: 5.4.3 # The lineage dataset is: embryophyta_odb10 (Creation date: 2024-01-08, number of genomes: 50, number of BUSCOs: 1614) # Summarized benchmarking in BUSCO notation for file /scratch/gbarrett/76/0e1882ddc7fd25fd6921f401092e3d/input_seqs/Qrubra_687_v2.0.fa # BUSCO was run in mode: euk_genome_met # Gene predictor used: metaeuk ***** Results: ***** C:97.9%[S:92.7%,D:5.2%],F:0.9%,M:1.2%,n:1614 1580 Complete BUSCOs (C) 1496 Complete and single-copy BUSCOs (S) 84 Complete and duplicated BUSCOs (D) 15 Fragmented BUSCOs (F) 19 Missing BUSCOs (M) 1614 Total BUSCO groups searched Assembly Statistics: 966 Number of scaffolds 1593 Number of contigs 739579365 Total length 0.848% Percent gaps 58 MB Scaffold N50 1 MB Contigs N50 Dependencies and versions: hmmsearch: 3.1 bbtools: 38.98 metaeuk: 6.a5d39d9 busco: 5.4.3