Nextflow workflow report

[focused_mendel]

Workflow execution completed unsuccessfully!

The exit status of the task that caused the workflow execution to fail was: null.

The full error message was:

SIGINT
Run times
03-Jun-2025 12:52:23 - 03-Jun-2025 12:56:45 (duration: 4m 21s)
  16 succeeded  
  0 cached  
  0 ignored  
  0 failed  
Nextflow command
nextflow run TreeGenes/new-study-pipeline -r main -profile xanadu --vcf /isg/treegenes/curation/TGDR2269/McKown_2014_GWAS.v3.vcf.gz --ref_genome 'Populus trichocarpa genome v3.0' --tgdr TGDR2269
CPU-Hours
0.1
Launch directory
/isg/treegenes/treegenes_store/FTP/VCF/TGDR2269
Work directory
/isg/treegenes/treegenes_store/FTP/VCF/TGDR2269/work
Project directory
/home/FCAM/tg-nginx/.nextflow/assets/TreeGenes/new-study-pipeline
Script name
main.nf
Script ID
536058302bb8707a536813d34b362955
Workflow session
f16feb03-ea8b-4543-960a-9fcb70175135
Workflow repository
https://gitlab.com/TreeGenes/new-study-pipeline, revision main (commit hash d13d8f35d9fa63c87c8fe5a5e7c8250759239250)
Workflow profile
xanadu
Nextflow version
version 23.10.1, build 5891 (12-01-2024 22:01 UTC)

Resource Usage

These plots give an overview of the distribution of resource usage for each process.

CPU

Memory

Job Duration

I/O

Tasks

This table shows information about each task in the workflow. Use the search box on the right to filter rows for specific values. Clicking headers will sort the table by that value and scrolling side to side will reveal more columns.

(tasks table omitted because the dataset is too big)