File explanation: standard: NCSU_standard_vcf.tar --> tar of all lanes and samples of NC state samples. Pita_merge_standard_snpeff.vcf.gz --> SNPeff annotated Pita_merge_standard.vcf. Pita_merge_standard.vcf --> Merge of NCSU_standard_vcf.tar, TAMU_standard_vcf.tar, UF_standard_vcf.tar, VA_standard_vcf.tar. TAMU_standard_vcf.tar --> tar of all TAMU samples. UF_standard_vcf.tar --> tar of all UF samples. VA_standard_vcf.tar --> tar of all VA samples. strict: NCSU_standard_vcf.tar.gz --> tar of all lanes and samples of NC state samples. Pita_merge_strict_snpeff.vcf.gz --> SNPeff annotated Pita_merge_strict.vcf.gz Pita_merge_strict.vcf.gz --> Merge of NCSU_standard_vcf.tar.gz, TAMU_standard_vcf.tar.gz, UF_strict_vcf.tar.gz, VA_strict_vcf.tar.gz TAMU_standard_vcf.tar.gz --> tar of all TAMU samples. UF_strict_vcf.tar.gz --> tar of all UF samples. VA_strict_vcf.tar.gz --> tar of all VA samples. *UN-tar: 1. Gunzip [file] 2. Tar -xvf [file]