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Tripal Plant PopGen Submissions

This page reflects community submissions associated with published studies. Each submission is associated with a longterm identifier that connects the genotype, phenotype, and/or environmental metrics assessed. These studies represent diversity assessements, association mapping, and landscape genomics. We accept studies with a variety of marker types. We encourage you to submit your study to TreeGenes and utilize the provided accession in your publication. We currently have 163 studies representing species. Studies that have georeferenced accessions associated with them can be queried on CartograTree.

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AccessionTitleSpeciesPopulation SizePhenotypes AssessedPhenotypic MeasuresGenotype Count
TGDR340Effects of fire regime on the population genetics of natural pine stands, in Genetic structure of forest trees in biodiversity hotspots at different spatial scales (Ph.D. thesis).Pinus halepensis

37499056
TGDR341Patterns of geographic distribution have a considerable influence on population genetic structure in one common and two rare species of Rhododendron (Ericaceae)Rhododendron amagianum

Rhododendron sanctum

Rhododendron weyrichii

9028825
TGDR342Genetic diversity of the endemic Canary Island pine tree, Pinus canariensis (Ph.D. thesis)Pinus canariensis

53411811
TGDR343High genetic diversity and distinctiveness of rear-edge climate relicts maintained by ancient tetraploidisation for Alnus glutinosaAlnus glutinosa

58725784
TGDR344AFLP diversity and spatial structure of Calycophyllum candidissimum (Rubiaceae), a dominant tree species of Nicaragua’s critically endangered seasonally dry forestCalycophyllum candidissimum

22049720
TGDR345Influence of northern limit range on genetic diversity and structure in a widespread North American tree, sugar maple (Acer saccharum Marshall)Acer saccharum

730463589
TGDR345Influence of northern limit range on genetic diversity and structure in a widespread North American tree, sugar maple (Acer saccharum Marshall)Acer saccharum

730463589
TGDR346Patterns of genetic diversity and differentiation in resistance gene clusters of two hybridizing European Populus speciesPopulus alba

Populus tremula

Populus tremula x Populus alba

40536450
TGDR349Comparative spatial genetics and epigenetics of plant populations: heuristic value and a proof of conceptHelleborus foetidus

2014422
TGDR350A Mesoamerican origin of cherimoya (Annona cherimola Mill.). Implications for the conservation of plant genetic resourcesAnnona cherimola

176531770
TGDR351Local genetic structure in the critically endangered, cave-associated perennial herb Primulina tabacum (Gesneriaceae)Primulina tabacum

2414338
TGDR352Understanding genetic diversity of relict forests. Linking long-term isolation legacies and current habitat fragmentation in Abies pinsapo BoissAbies pinsapo

18917329
TGDR353Approximate Bayesian computation analysis of EST-associated microsatellites indicates that the broadleaved evergreen tree Castanopsis sieboldii survived the Last Glacial Maximum in multiple refugia in JapanCastanopsis sieboldii

79242768
TGDR354Habitat differences influence genetic impacts of human land use on the American beech (Fagus grandifolia)Fagus grandifolia

5023514
TGDR356Genetic diversity and structure of Lolium perenne ssp. multiflorum in California vineyards and orchards indicates potential for spread of herbicide resistance via gene flowLolium perenne

4119871
TGDR357Contrasted patterns of local adaptation to climate change across the range of an evergreen oak, Quercus aquifolioidesQuercus aquifolioides

5879298
TGDR358Hurricanes overcome migration lag and shape intraspecific genetic variation beyond a poleward mangrove range limitAvicennia germinans

1735160
TGDR377Strong genetic differentiation on a small geographic scale in the Neotropical rainforest understory tree Paypayrola blanchetiana (Violaceae)Paypayrola blanchetiana

2855457
TGDR382Gene frequency shift in relict Abies pinsapo forests associated with drought-induced mortality. Preliminary evidences of local-scale divergent selectionAbies pinsapo

1152230230
TGDR397Phylogeny and biogeography of the American live oaks (Quercus subsection Virentes): a genomic and population genetics approachQuercus brandegeei

Quercus fusiformis

Quercus geminata

Quercus minima

Quercus oleoides

Quercus sagraeana

Quercus virginiana

63814036

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