Tripal Plant PopGen Submission Sets (TPPS)

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Tripal Plant PopGen Submissions

This page reflects community submissions associated with published studies. Each submission is associated with a longterm identifier that connects the genotype, phenotype, and/or environmental metrics assessed. These studies represent diversity assessements, association mapping, and landscape genomics. We accept studies with a variety of marker types. We encourage you to submit your study to TreeGenes and utilize the provided accession in your publication. We currently have 163 studies representing species. Studies that have georeferenced accessions associated with them can be queried on CartograTree.

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Accession	Title	Species	Population Size	Phenotypes Assessed	Phenotypic Measures	Genotype Count
TGDR101	Genetic and morphological differentiation in populus nigra l.: isolation by colonization or isolation by adaptation?	Populus nigra	3259	12	32940	5544
TGDR120	Climate and competition effects on tree growth in Rocky Mountain forests	Abies lasiocarpa Picea engelmannii Pinus contorta Pinus ponderosa Pseudotsuga menziesii	771	6	185268
TGDR121	Distinct niche divergence characterizes the homoploid hybrid speciation of Pinus densata on the Tibetan Plateau	Pinus densata Pinus tabuliformis Pinus yunnanensis	412	2	26780
TGDR122	Microsatellite primers for the Pacific Northwest endemic conifer Chamaecyparis lawsoniana (Cupressaceae)	Chamaecyparis lawsoniana	64			2816
TGDR124	Climate-related adaptive genetic variation and population structure in natural stands of Norway spruce in the South-Eastern Alps	Picea abies	826			883820
TGDR127	Geographical isolation and environmental heterogeneity contribute to the spatial genetic patterns of Quercus kerrii (Fagaceae)	Quercus kerrii	3144			23580
TGDR127	Geographical isolation and environmental heterogeneity contribute to the spatial genetic patterns of Quercus kerrii (Fagaceae)	Quercus kerrii	3144			23580
TGDR131	Genetic divergence and signatures of natural selection in marginal populations of a keystone, long-lived conifer, eastern white pine (Pinus strobus) from northern Ontario	Pinus strobus	614			67540
TGDR133	Extending glacial refugia for a European tree: genetic markers show that Iberian populations of white elm are native relicts and not introductions	Ulmus laevis Pallas	242			14520
TGDR136	Population genetic structure of the endemic rosewoods Dalbergia cochinchinensis and D. oliveri at a regional scale reflects the Indochinese landscape and life-history traits	Dalbergia cochinchinensis Dalbergia oliveri	988			31848
TGDR138	Stage and size structure of three species of oaks in central coastal California	Quercus agrifolia Quercus douglasii Quercus lobata	11216	9	201888
TGDR165	Conservation of old individual trees and small populations is integral to maintain species’ genetic diversity of a historically fragmented woody perennial	Eucalyptus caesia	2175			60900
TGDR170	Population clustering and clonal structure evidence the relict state of Ulmus minor Mill. in the Balearic Islands	Ulmus minor	260			4662
TGDR175	Contrasting influences of geographic range and distribution of populations on patterns of genetic diversity in two sympatric Pilbara Acacias	Acacia ancistrocarpa Acacia atkinsiana	888			39072
TGDR176	Genetic connectivity and diversity in inselberg populations of Acacia woodmaniorum, a rare endemic of the Yilgarn Craton banded iron formations	Acacia woodmaniorum	573			17190
TGDR183	Genotype-by-environment interaction in Corymbia citriodora (Hook.) K. D. Hill, & L. A. S. Johnson progeny test in Luiz Antonio, Brazil.	Corymbia citriodora	5040
TGDR191	The geographical and environmental determinants of genetic diversity for four alpine conifers of the European Alps	Abies alba Larix decidua Pinus cembra Pinus mugo	3888			1463240
TGDR196	Applying landscape genomic tools to forest management and restoration of Hawaiian koa (Acacia koa) in a changing environment	Acacia koa Acacia koaia	314			1672304
TGDR198	Adaptation to local climate in a multi-trait space: evidence from silver fir (Abies alba Mill.) populations across a heterogeneous environment	Abies alba	387			144738
TGDR231	A linkage disequilibrium perspective on the genetic mosaic of speciation in two hybridizing Mediterranean white oaks	Quercus faginea Quercus pyrenaica	192			37632

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