Tripal Plant PopGen Submission Sets (TPPS)

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Tripal Plant PopGen Submissions

This page reflects community submissions associated with published studies. Each submission is associated with a longterm identifier that connects the genotype, phenotype, and/or environmental metrics assessed. These studies represent diversity assessements, association mapping, and landscape genomics. We accept studies with a variety of marker types. We encourage you to submit your study to TreeGenes and utilize the provided accession in your publication. We currently have 163 studies representing species. Studies that have georeferenced accessions associated with them can be queried on CartograTree.

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Accession	Title	Species	Population Size	Phenotypes Assessed	Phenotypic Measures	Genotype Count
TGDR039	Genetic diversity and inbreeding in natural and managed populations of Scots pine	Pinus sylvestris	3506			66744
TGDR040	A candidate gene-based association study reveals significantly associated SNPs with bud burst in European beech (Fagus sylvatica L.)	Fagus sylvatica	1405	3	5620	64630
TGDR041	Using genetic diversity and mating system parameters estimated from genetic markers to determine strategies for the conservation of Araucaria angustifolia (Bert.) O. Kuntze (Araucariaceae)	Araucaria angustifolia	2282			22820
TGDR041	Using genetic diversity and mating system parameters estimated from genetic markers to determine strategies for the conservation of Araucaria angustifolia (Bert.) O. Kuntze (Araucariaceae)	Araucaria angustifolia	2282			22820
TGDR042	Protected areas of Spain preserve the genetic diversity of Quercus ilex L. irrespective of glacial refugia	Quercus ilex	666			137860
TGDR043	Phylogeography of Syringa josikaea (Oleaceae): Early Pleistocene divergence from East Asian relatives and survival in small populations in the Carpathians	Syringa josikaea	270			1080
TGDR043	Phylogeography of Syringa josikaea (Oleaceae): Early Pleistocene divergence from East Asian relatives and survival in small populations in the Carpathians	Syringa josikaea	270			1080
TGDR044	Parentage reconstruction in Eucalyptus nitens using SNPs and microsatellites: a comparative analysis of marker data power and robustness.	Eucalyptus nitens	154			4466
TGDR044	Parentage reconstruction in Eucalyptus nitens using SNPs and microsatellites: a comparative analysis of marker data power and robustness.	Eucalyptus nitens	154			4466
TGDR045	Genetic structure and internal gene flow in populations of Schinus molle (Anacardiaceae) in the Brazilian Pampa	Schinus molle	556			69500
TGDR045	Genetic structure and internal gene flow in populations of Schinus molle (Anacardiaceae) in the Brazilian Pampa	Schinus molle	556			69500
TGDR046	Estimating heritability of disease resistance and factors that contribute to long-term survival in butternut (Juglans cinerea L.)	Juglans cinerea	928			20416
TGDR046	Estimating heritability of disease resistance and factors that contribute to long-term survival in butternut (Juglans cinerea L.)	Juglans cinerea	928			20416
TGDR047	Genetic structure among the northern remnant populations of Quercus serrata, konara oak	Quercus serrata	1330			14630
TGDR047	Genetic structure among the northern remnant populations of Quercus serrata, konara oak	Quercus serrata	1330			14630
TGDR048	Gene flow and genetic structure of a mountain riparian tree species, Euptelea pleiospermum (Eupteleaceae): how important is the stream dendritic network?	Euptelea pleiospermum	480			3840
TGDR048	Gene flow and genetic structure of a mountain riparian tree species, Euptelea pleiospermum (Eupteleaceae): how important is the stream dendritic network?	Euptelea pleiospermum	480			3840
TGDR050	Analysis of the genetic variation in growth, ecophysiology, and chemical and metabolomic composition of wood of Populus trichocarpa provenances	Populus trichocarpa	920	175	161000
TGDR050	Analysis of the genetic variation in growth, ecophysiology, and chemical and metabolomic composition of wood of Populus trichocarpa provenances	Populus trichocarpa	920	175	161000
TGDR052	Assessing the genetic diversity and population structure of black alder (Alnus glutinosa [L.] Gaertn) using nuclear SSR and CpDNA markers	Alnus glutinosa	610			8540

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